Temu, T.; Mann, M.; Räschle, M.; Cox, J.: Homology-driven assembly of NOn-redundant protEin sequence sets (NOmESS) for mass spectrometry. Bioinformatics 32 (9), S. 1417 - 1419 (2016)

Tenorio, M. J.; Ross, B. H.; Luchsinger, C.; Rivera-Dictter, A.; Arriagada, C.; Acuna, D.; Aguilar, M.; Cavieres, V.; Burgos, P. V.; Ehrenfeld, P. et al.; Mardones, G. A.: Distinct Biochemical Pools of Golgi Phosphoprotein 3 in the Human Breast Cancer Cell Lines MCF7 and MDA-MB-231. PLOS ONE 11 (4), e0154719 (2016)

Theodosiou, M.; Widmaier, M.; Böttcher, R. T.; Rognoni, E.; Veelders, M.; Bharadwaj, M.; Lambacher, A.; Austen, K.; Müller, D. J.; Zent, R. et al.; Fässler, R.: Kindlin-2 cooperates with talin to activate integrins and induces cell spreading by directly binding paxillin. ELIFE 5, e10130 (2016)

Toth, A.; Barna, T.; Szabo, E.; Elek, R.; Hubert, A.; Nagy, I.; Nagy, I.; Kriszt, B.; Tancsics, A.; Kukolya, J.: Cloning, Expression and Biochemical Characterization of Endomannanases from Thermobifida Species Isolated from Different Niches. PLoS One 11 (5), e0155769 (2016)

Tyanova, S.; Albrechtsen, R.; Kronqvist, P.; Cox, J.; Mann, M.; Geiger, T.: Proteomic maps of breast cancer subtypes. NATURE COMMUNICATIONS 7, 10259 (2016)

Tyanova, S.; Temu, T.; Cox, J.: The MaxQuant computational platform for mass spectrometry-based shotgun proteomics. Nature Protocols 11 (12), S. 2301 - 2319 (2016)

Tyanova, S.; Temu, T.; Sinitcyn, P.; Carlson, A.; Hein, M. Y.; Geiger, T.; Mann, M.; Cox, J.: The Perseus computational platform for comprehensive analysis of (prote)omics data. Nature methods 13 (9), S. 731 - 740 (2016)

Uckelmann, H.; Blaszkiewicz, S.; Nicolae, C.; Haas, S.; Schnell, A.; Wurzer, S.; Wagener, R.; Aszodi, A.; Essers, M. A. G.: Extracellular matrix protein Matrilin-4 regulates stress-induced HSC proliferation via CXCR4. Journal of Experimental Medicine 213 (10), S. 1961 - 1971 (2016)

Vukovic, L.; Chipot, C.; Makino, D. L.; Conti, E.; Schulten, K.: Molecular Mechanism of Processive 3 ' to 5 ' RNA Translocation in the Active Subunit of the RNA Exosome Complex. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 138 (12), S. 4069 - 4078 (2016)

Walerych, D.; Lisek, K.; Sommaggio, R.; Piazza, S.; Ciani, Y.; Dalla, E.; Rajkowska, K.; Gaweda-Walerych, K.; Ingallina, E.; Tonelli, C. et al.; Morelli, M. J.; Amato, A.; Eterno, V.; Zambelli, A.; Rosato, A.; Amati, B.; Wisniewski, J. R.; Del Sal, G.: Proteasome machinery is instrumental in a common gain-of-function program of the p53 missense mutants in cancer. Nature Cell Biology 18 (8), S. 897 - 909 (2016)

Warnke, E.; Kopp, S.; Wehland, M.; Hemmersbach, R.; Bauer, J.; Pietsch, J.; Infanger, M.; Grimm, D.: Thyroid Cells Exposed to Simulated Microgravity Conditions - Comparison of the Fast Rotating Clinostat and the Random Positioning Machine. Microgravity Science and Technology 28 (3), S. 247 - 260 (2016)

Wehland, M.; Warnke, E.; Frett, T.; Hemmersbach, R.; Hauslage, J.; Ma, X.; Aleshcheva, G.; Pietsch, J.; Bauer, J.; Grimm, D.: The Impact of Hypergravity and Vibration on Gene and Protein Expression of Thyroid Cells. Microgravity Science and Technology 28 (3), S. 261 - 274 (2016)

Wisniewski, J. R.: Quantitative Evaluation of Filter Aided Sample Preparation (FASP) and Multienzyme Digestion FASP Protocols. Analytical Chemistry 88 (10), S. 5438 - 5443 (2016)

Wisniewski, J. R.; Mann, M.: A Proteomics Approach to the Protein Normalization Problem: Selection of Unvarying Proteins for MS-Based Proteomics and Western Blotting. Journal of Proteome Research 15 (7), S. 2321 - 2326 (2016)

Wisniewski, J. R.; Vildhede, A.; Noren, A.; Artursson, P.: In-depth quantitative analysis and comparison of the human hepatocyte and hepatoma cell line HepG2 proteomes. JOURNAL OF PROTEOMICS 136, S. 234 - 247 (2016)

Wisniewski, J. R.; Wegler, C.; Artursson, P.: Subcellular fractionation of human liver reveals limits in global proteomic quantification from isolated fractions. Analytical Biochemistry 509, S. 82 - 88 (2016)

Wright, R. H. G.; Lioutas, A.; Le Dily, F.; Soronellas, D.; Pohl, A.; Bonet, J.; Nacht, A. S.; Samino, S.; Font-Mateu, J.; Vicent, G. P. et al.; Wierer, M.; Trabado, M. A.; Schelhorn, C.; Carolis, C.; Macias, M. J.; Yanes, O.; Oliva, B.; Beato, M.: ADP-ribose-derived nuclear ATP synthesis by NUDIX5 is required for chromatin remodeling. Science 352 (6290), S. 1221 - 1225 (2016)

Yang, P.; Humphrey, S. J.; James, D. E.; Yang, Y. H.; Jothi, R.: Positive-unlabeled ensemble learning for kinase substrate prediction from dynamic phosphoproteomics data. Bioinformatics 32 (2), S. 252 - 259 (2016)

Yang, P.; Patrick, E.; Humphrey, S. J.; Ghazanfar, S.; James, D. E.; Jothi, R.; Yang, J. Y. H.: KinasePA: Phosphoproteomics data annotation using hypothesis driven kinase perturbation analysis. PROTEOMICS 16 (13), S. 1868 - 1871 (2016)

Zachariae, W.; Tyson, J. J.: Cell Division: Flipping the Mitotic Switches. Current Biology 26 (24), S. R1272 - R1274 (2016)