Blaessle, A.: A systems biology approach to axis formation during early zebrafish embryogenesis: from biophysical measurements to model inference. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2018)

Wang, M.: The genetic basis of adaptation and speciation in benthic and limnetic threespine stickleback (Gasterosterus aculeatus). Dissertation, 220 pp., Eberhard-Karls-Universität, Tübingen, Germany (2018)

Pallares, L.: Genetic architecture of craniofacial shape in the house mouse: a genetic and morphological perspective. Dissertation, 125 pp., Christian-Albrechts-Universität, Kiel, Germany (2015)

Sachdev, R.: Functional Characterization of the Nup93 Complex in Nuclear Pore Complex Assembly. Dissertation, 178 pp., Eberhard-Karls-Universität, Tübingen, Germany (2013)

Lehmann, R.: Regionsspezifische Segmentierungsmutanten bei Drosophila melanogaster Meigen. Dissertation, 190 pp., Eberhard-Karls-Universität, Tübingen,Germany (1985)

Cuntz, H.: Spatial distribution of membrane parameters in fly neurons: a modeling study. Diploma, Eberhard-Karls-Universität, Tübingen, Germany (2000)

Zien, A.; Rätsch, G.; Ong, C.: Towards the Inference of Graphs on Ordered Vertexes (Technical Report of the Max Planck Institute for Biological Cybernetics, 150). Max Planck Institute for Biological Cybernetics, Tübingen, Germany (2006), 9 pp.

Zien, A.; Ong, C.: An Automated Combination of Sequence Motif Kernels for Predicting Protein Subcellular Localization (Technical Report of the Max Planck Institute for Biological Cybernetics, 146). Max Planck Institute for Biological Cybernetics, Tübingen, Germany (2006), 18 pp.

Chan, Y.: Evolution: two (very long) legs to stand on. Current Biology 25 (21), pp. R1037 - R1040 (2015)

Chan, Y.: A personal primer for modern biology. Trends in Ecology and Evolution 27 (11), pp. 592 - 593 (2012)

Chan, Y.: Hearing echoes. Heredity 108 (2), pp. 471 - 472 (2012)

Chan, Y.; Dreau, A.; Kucka, M.: Haplotagging: haplotype phasing and single-tube combinatorial barcoding of nucleic acid molecules using bead-immobilized Tn5 transposase. AU2020220461A1 (2021)

Su, D.; Peters, M.; Soltys, V.; Chan, Y.: Copy number normalization distinguishes differential signals driven by copy number differences in ATAC-seq and ChIP-seq. (submitted)

Soltys, V.; Peters, M.; Su, D.; Kučka, M.; Chan, Y.: Flexible and high-throughput simultaneous profiling of gene expression and chromatin accessibility in single cells. (submitted)

Ullrich, T.; Pollmann, C.; Ritter, M.; Haaf, J.; Aghaallae, N.; Tesakov, I.; El-Riz, M.; Maksymenko, K.; Hatskovska, V.; Kandabarau, S. et al.; Klimiankou, M.; Lengerke, C.; Welte, K.; Hernandez-Alvarez, B.; Müller, P.; Lupas, A.; Piehler, J.; Skokowa, J.; ElGamacy, M.: Tuning of granulopoietic signaling by de novo designed agonists. (submitted)

Seah, B.; Singh, A.; Vetter, D.; Emmerich, C.; Peters, M.; Soltys, V.; Huettel, B.; Swart, E.: Nuclear dualism without extensive DNA elimination in the ciliate Loxodes magnus. (submitted)

Venu, V.; Harjunmaa, E.; Dreau, A.; Brady, S.; Absher, D.; Kingsley, D.; Jones, F.: Fine-scale contemporary recombination variation and its fitness consequences in adaptively diverging stickleback fish. (submitted)

Melo, D.; Pallares, L.; Ayroles, J.: Reassessing the modularity of gene co-expression networks using the Stochastic Block Model. (submitted)

Wolf, S.; Abhyankar, V.; Melo, D.; Ayroles, J.; Pallares, L.: From GWAS to signal validation: An approach for estimating SNP genetic effects while preserving genomic context. (submitted)

Pallares, L.; Melo, D.; Wolf, S.; Cofer, E.; Abhyankar , V.; Peng, J.; Ayroles, J.: Saturating the eQTL map in Drosophila melanogaster: genome-wide patterns of cis and trans regulation of transcriptional variation in outbred populations. (submitted)