Unlocking the secrets of animal groups
Inside an 18th-century barn, a research lab captures the interactions within animal groups in unprecedented detail
Researchers from the Cluster of Excellence Centre for the Advanced Study of Collective Behaviour at the University of Konstanz and the Max Planck Institute of Animal Behavior have converted a former barn into a cutting-edge technology lab for complex behavioral analysis. In it, they can now study the intricate behaviour of animal groups. The barn also served as a prototype for the largest collective behaviour lab at the University of Konstanz: the Imaging Hangar.
A major limitation in behavioral research is that scientists can either study animals under highly-controlled, yet often unrealistically simplified and small, environments in the lab, or in largely uncontrolled conditions in the wild. This has limited our ability to study many facets of behavior, including collective behavior—the movements and interactions among animals that underlie their complex social lives.
What is needed to address this? First, a place with lots of space. Second, state of the art technology. Both are available in an 18th-century barn at the Max Planck Institute of Animal Behavior in Möggingen near Konstanz and the Imaging Hangar, a hall the size of a gymnasium at the University of Konstanz. Both labs are used to closely examine the group behavior of animals. To do so in a multidimensional way, researchers from the Cluster of Excellence Centre for the Advanced Study of Collective Behaviour at the University of Konstanz and the Max Planck Institute of Animal Behavior have developed a tool called Smart-barn.
Smart-barn is an acronym for Scalable Multimodal Arena for Real-time Tracking Behaviour of Animals in large numbers. “It is a new tool that allows studying complex behavior traits of an individual or interactions between groups of animals like insects, birds, or mammals,” says Hemal Naik, an author on the study and a postdoctoral scientist with the Cluster of Excellence Centre for the Advanced Study of Collective Behaviour. An team interdisciplinary team of scientists from the cluster and the Max Planck Institute of Animal Behavior worked together to develop Smart-barn.
The team of biologists, physicists, engineers and computer scientists included Naik, Máté Nagy and Iain Couzin. “We are using high throughput measurement techniques like optical and acoustic tracking, with which we can study the exact 3D position and posture of animals and calculate their field of view,” says Máté Nagy, who leads a research group MTA-ELTE in Hungary. Users of the new facility will have the flexibility to perform different experimental paradigms by leveraging the modular nature of the system.
Why scale matters
“Smart barn is designed to enhance the scale of typical indoor behavioral experiments in terms of experimental volume, measured behavior traits, and group sizes,” says Naik. “This means that users can measure previously unseen behavioral repertoires because animals have more space.” The facility can – depending on the size of the animals – host hundreds of animals simultaneously and extend the possibility of experiments to novel species typically not studied in indoor environments. “In fact, we have now scaled this to work with many thousands of animals,” adds Iain Couzin, who is a director at the Max Planck Institute and co-speaker of the Cluster of Excellence Centre. “We recently conducted a study in the Imaging Hangar where we tracked ten thousand plague locusts. This would have been impossible without our Smart-barn technology.”
How Smart-barn can be used
So far, Smart-barn has been used to study subjects as diverse as pigeons, starlings, moth, bats, and humans. “The facility is shaping important new interdisciplinary collaborations,” says Naik. “For example, Smart-barn offers the ability to track 3D gaze and posture of birds in a group of ten or more while maintaining their identity. This technique is being used by researchers to explore the role of gaze in decision making.” The same technique is used by computer scientists to design novel computer vision and AI based algorithms facilitating 3D tracking of animals without attaching any markers to them. “Our method has resulted in an even larger system in the Imaging Hangar at the University of Konstanz to track swarms of robots or thousands of insects,” says Couzin.
Nagy says: “In a nutshell, the scope of its applications is only limited by our ability to come up with ideas of experimentation.” The team imagines the facility to be a collaborative space where researchers from all over the globe can contribute to the exploration of behavioral questions. Therefore, the team invites researchers across the world to connect with them and plan experiments.