Scientific Publications

Amanda, D.; Frey, F. P.; Neumann, U.; Przybyl, M.; Šimura, J.; Zhang, Y.; Chen, Z.; Gallavotti, A.; Fernie, A. R.; Ljung, K. et al.; Acosta, I. F.: Auxin boosts energy generation pathways to fuel pollen maturation in barley. Current Biology (2022)

Fulgione, A.; Neto, C.; Elfarargi, A. F.; Tergemina, E.; Ansari, S.; Göktay, M.; Dinis, H.; Döring, N.; Flood, P. J.; Rodriguez-Pacheco, S. et al.; Walden, N.; Koch, M.A.; Roux, F.; Hermisson, J.; Hancock, A. M.: Parallel reduction in flowering time from de novo mutations enable evolutionary rescue in colonizing lineages. Nature Communications 13 (1), 1461 (2022)

Sun, H.-Q.; Jiao, W.-B.; Krause, K.; Campoy, J. A.; Goel, M.; Folz-Donahue, K.; Kukat, C.; Huettel, B.; Schneeberger, K.: Chromosome-scale and haplotype-resolved genome assembly of a tetraploid potato cultivar. Nature Genetics 54, pp. 342 - 348 (2022)

Bourceret, A.; Guan, R.; Dorau, K.; Mansfeldt, T.; Omidbakhshfard, A.; Medeiros, D. B.; Fernie, A. R.; Hofmann, J.; Sonnewald, U.; Mayer, J. et al.; Gerlach, N.; The RECONSTRUCT consortium; Bucher, M.; Garrido Oter, R.; Spaepen, S.; Schulze-Lefert, P.: Maize Field Study Reveals Covaried Microbiota and Metabolic Changes in Roots over Plant Growth. mBio, e02584-21 (2022)

Ma, K.-W.; Ordon, J.; Schulze-Lefert, P.: Gnotobiotic Plant Systems for Reconstitution and Functional Studies of the Root Microbiota. Current Protocols 2, e362 (2022)

Tzortzakis, N.; Pitsikoulaki, G.; Stamatakis, A.: Ammonium to Total Nitrogen Ratio Interactive Effects with Salinity Application on Solanum lycopersicum Growth, Physiology, and Fruit Storage in a Closed Hydroponic System. Agronomy 12 (2), 386 (2022)

Saur, , I. M. L.; Lawson, A. W.; Schulze-Lefert, P.: Buy one, get two. Nature Plants 8, pp. 100 - 101 (2022)

van Rengs, W. M. J.; Schmidt, M. H.-W.; Effgen, S.; Le, D. B.; Wang, Y.; Zaidan, M. W. A.; Huettel, B.; Schouten, H. J.; Usadel, B.; Underwood, C. J.: A chromosome scale tomato genome built from complementary PacBio and Nanopore sequences alone reveals extensive linkage drag during breeding. The Plant Journal (2022)

Durán, P.; Flores-Uribe, J.; Wippel, K.; Zhang, P.; Guan, R.; Guan, R.; Melkonian, B.; Melkonian, M.; Garrido Oter, R.; Zhang, P.: Shared features and reciprocal complementation of the Chlamydomonas and Arabidopsis microbiota. Nature Communications 13 (406) (2022)

Schmitz, R. J.; Marand, A. P.; Zhang, X.; Mosher, R. A.; Turck, F.; Chen, X.; Axtell, M. J.; Zhong, X.; Brady, S. M.; Megraw, M. et al.; Meyers, B. C.: Quality control and evaluation of plant epigenomics data. Plant Cell Physiology 34 (1), pp. 503 - 513 (2022)

Parker, J.; Hessler, G.; Cui, H.: A new biochemistry connecting pathogen detection to induced defense in plants. New Phytologist (2021)

Wolinska, K. W.; Vannier, N.; Thiergart, T.; Pickel, B.; Gremmen, S.; Piasecka, A.; Piślewska-Bednarek, M.; Nakano, R. T.; Belkhadir, Y.; Bednarek, P. et al.; Hacquard, S.: Tryptophan metabolism and bacterial commensals prevent fungal dysbiosis in Arabidopsis roots. Proceedings of the National Academy of Sciences of the United States of America 118 (49), e2111521118 (2021)

Mataigne, V.; Vannier, N.; Vandenkoornhuyse, P.; Hacquard, S.: Microbial Systems Ecology to Understand Cross-Feeding in Microbiomes. Frontiers in Microbiology 12 (2021)

Mesny, F.; Miyauchi, S.; Thiergart, T.; Pickel, B.; Atanasova, L.; Karlsson, M.; Huettel, B.; Barry, K.W.; Haridas, S.; Chen, C. et al.; Bauer, D.; Andreopoulos, W.; Pangilinan, J.; LaButti, K.; Riley, R.; Lipzen, A.; Clum, A.; Drula, E.; Henrissat, B.; Kohler, A.; Grigoriev, I.V.; Martin, F.M.; Hacquard, S.: Genetic determinants of endophytism in the Arabidopsis root mycobiome. Nature Communications 12, 7227 (2021)

Loo, E.; Tajima, Y.; Yamada, K.; Kido, S.; Hirase, T.; Ariga, H.; Fujiwara, T.; Tanaka, K.; Taji, T.; Somssich, I. et al.; Parker, J. E.; Saijo, Y.: Recognition of microbe/damage-associated molecular patterns by leucine-rich repeat pattern recognition receptor kinases confers salt tolerance in plants. Molecular Plant-Microbe Interactions (2021)

Mahdi, L.; Miyauchi, S.; Uhlmann, C.; Garrido-Oter, R.; Langen, G.; Wawra, S.; Niu, Y.; Guan, R.; Guan, R.; Robertson-Albertyn, S. et al.; Bulgarelli, D.; Parker, J. E.; Zuccaro, A.: The fungal root endophyte Serendipita vermifera displays inter-kingdom synergistic beneficial effects with the microbiota in Arabidopsis thaliana and barley. The ISME Journal (2021)

Durán, P.; Reinstädler, A.; Rajakrut, A.; Hashimoto, M.; Garrido Oter, R.; Schulze-Lefert, P.; Panstruga, R.: A fungal powdery mildew pathogen induces extensive local and marginal systemic changes in the Arabidopsis thaliana microbiota. Environmental Microbiology 23 (10), pp. 6292 - 6308 (2021)

Pruitt, R. N.; Locci, F.; Wanke, F.; Zhang, L.; Saile, S. C.; Joe, A.; Karelina, D.; Hua, C.; Fröhlich, K.; Wan, W.-L. et al.; Hu, M.; Rao, S.; Stolze, S. C.; Harzen, A.; Gust, A. A.; Harter, K.; Joosten, M. H. A. J.; Thomma, B. P. H. J.; Zhou, J.-M.; Dangl, J. L.; Weigel, D.; Nakagami, H.; Oecking, C.; Kasmi, F. E.; Parker, J. E.; Nürnberger, T.: The EDS1–PAD4–ADR1 node mediates Arabidopsis pattern-triggered immunity. Nature (2021)

Burns, R.; Mandakova, T.; Gunis, J.; Soto-Jiménez, L. M.; Liu, C.; Lysak, M. A.; Novikova, P. Y.; Nordborg, M.: Gradual evolution of allopolyploidy in Arabidopsis suecica. Nature Ecology & Evolution (2021)

Yu, P.; He, X.; Baer, M.; Beirinckx, S.; Tian, T.; Moya, Y. A. T.; Zhang, X.; Deichmann, M.; Frey, F. P.; Bresgen, V. et al.; Li, C.; Razavi, B. S.; Schaaf, G.; von Wirén, N.; Su, Z.; Bucher, M.; Tsuda, K.; Goormachtig, S.; Chen, X.; Hochholdinger, F.:.: Plant flavones enrich rhizosphere Oxalobacteraceae to improve maize performance under nitrogen deprivation. Nature Plants (2021)