Scientific Publications

Journal Article (2205)

1.
Journal Article
Sobti, M.; Mead, B.; Stewart, A.; Igreja, C.; Christie, M.: Molecular basis for GIGYF-TNRC6 complex assembly. RNA: A Publication of the RNA Society 29 (6), pp. 724 - 734 (2023)
2.
Journal Article
Bazin, J.; Elvira-Matelot, E.; Blein, T.; Jauvion, V.; Bouteiller, N.; Cao, J.; Crespi, M.; Vaucheret, H.: Synergistic action of the Arabidopsis spliceosome components PRP39a and SmD1b in promoting post-transcriptional transgene silencing. Plant Cell 35 (6), koad091, pp. 1917 - 1935 (2023)
3.
Journal Article
Pinto, Y.; Frishman, S.; Turjeman, S.; Eshel, A.; Nuriel-Ohayon, M.; Shrossel, O.; Ziv, O.; Walters, W.; Parsonnet, J.; Ley, C. et al.; Johnson, E.; Kumar, K.; Schweitzer, R.; Khatib, S.; Magzal, F.; Muller, E.; Tamir, S.; Tenenbaum-Gavish, K.; Rautava, S.; Salminen, S.; Isolauri, E.; Yariv, O.; Peled, Y.; Poran, E.; Chen, R.; Hod, M.; Borenstein, E.; Ley, R.; Schwartz, B.; Louzoun, Y.; Hadar, E.; Koren, O.: Gestational diabetes is driven by microbiota-induced inflammation months before diagnosis. Gut 72 (5), gutjnl-2022-328406, pp. 918 - 928 (2023)
4.
Journal Article
Kersten, S.; Chang, J.; Huber, C.; Voichek, Y.; Lanz, C.; Hagmaier, T.; Lang, P.; Lutz, U.; Hirschberg, I.; Lerchl, J. et al.; Porri, A.; Van de Peer, Y.; Schmid, K.; Weigel, D.; Rabanal, F.: Standing genetic variation fuels rapid evolution of herbicide resistance in blackgrass. Proceedings of the National Academy of Sciences of the United States of America 120 (16), e2206808120 (2023)
5.
Journal Article
Vallebueno-Estrada, M.; Hernández-Robles, G.; González-Orozco, E.; López-Valdivia, I.; Rosales Tham, R.; Vásquez Sánchez, V.; Swarts, K.; Dillehay, T.; Vielle-Calzada, J.; Montiel, R.: Domestication and lowland adaptation of coastal preceramic maize from Paredones, Peru. eLife 12, e83149 (2023)
6.
Journal Article
Ferguson, S.; Jones, A.; Murray, K.; Schwessinger, B.; Borevitz, J.: Interspecies genome divergence is predominantly due to frequent small scale rearrangements in Eucalyptus. Molecular Ecology 32 (6), pp. 1271 - 1287 (2023)
7.
Journal Article
Jaegle, B.; Pisupati, H.; Soto-Jiménez, L.; Burns, R.; Rabanal, F.; Nordborg, M.: Extensive sequence duplication in Arabidopsis revealed by pseudo-heterozygosity. Genome Biology 24 (1), 44 (2023)
8.
Journal Article
Lenuzzi, M.; Witte, H.; Riebesell, M.; Rödelsperger, C.; Hong, R.; Sommer, R.: Influence of environmental temperature on mouth-form plasticity in Pristionchus pacificus acts through daf-11-dependent cGMP signaling. Journal of Experimental Zoology Part B-Molecular and Developmental Evolution 340 (2), pp. 214 - 224 (2023)
9.
Journal Article
Chen, X.-R.; Poudel, L.; Hong, Z.; Johnen, P.; Katti, S.; Tripathi, A.; Nile, A.; Green, S.; Khan, D.; Schaaf, G. et al.; Bono, F.; Bankaitis, V.: Mechanisms by Which Small Molecules of Diverse Chemotypes Arrest Sec14 Lipid Transfer Activity. The Journal of Biological Chemistry 299 (2), 102861 (2023)
10.
Journal Article
Zozaya, S.; Teasdale, L.; Tedeschi, L.; Higgie, M.; Hoskin, C.; Moritz, C.: Initiation of speciation across multiple dimensions in a rock-restricted, tropical lizard. Molecular Ecology 32 (3), pp. 680 - 695 (2023)
11.
Journal Article
Bakker, R.; Ellers, J.; Roelofs, D.; Vooijs, R.; Dijkstra, T.; van Gestel, C.; Hoedjes, K.: Combining time-resolved transcriptomics and proteomics data for Adverse Outcome Pathway refinement in ecotoxicology. Science of the Total Environment 869, 161740 (2023)
12.
Journal Article
Christie, M.; Igreja, C.: eIF4E-homologous protein (4EHP): a multifarious cap-binding protein. The FEBS Journal 290 (2), pp. 266 - 285 (2023)
13.
Journal Article
Kennedy, K.; de Goffau, M.; Perez-Muñoz, M.; Arrieta, M.-C.; Bäckhed, F.; Bork, P.; Braun, T.; Bushman, F.; Dore, J.; de Vos, W. et al.; Earl, A.; Eisen, J.; Elovitz, M.; Ganal-Vonarburg, S.; Gänzle, M.; Garrett, W.; Hall, L.; Hornef, M.; Huttenhower, C.; Konnikova, L.; Lebeer, S.; Macpherson, A.; Massey, R.; McHardy, A.; Koren, O.; Lawley, T.; Ley, R.; O'Mahony, L.; O'Toole, P.; Pamer, E.; Parkhill, J.; Raes, J.; Rattei, T.; Salonen, A.; Segal, E.; Segata, N.; Shanahan, F.; Sloboda, D.; Smith, D.; Sokol, H.; Spector, T.; Surette, M.; Tannock, G.; Walker, A.; Yassour, M.; Walter, J.: Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies. Nature 613 (7945), pp. 639 - 649 (2023)
14.
Journal Article
Pierella Karlusich, J.; Pelletier, E.; Zinger, L.; Lombard, F.; Zingone, A.; Colin, S.; Gasol, J.; Dorrell, R.; Henry, N.; Scalco, E. et al.; Acinas, S.; Wincker, P.; de Vargas, C.; Bowler, S.: A robust approach to estimate relative phytoplankton cell abundances from metagenomes. Molecular Ecology Resources 23 (1), pp. 16 - 40 (2023)
15.
Journal Article
Schönecker, S.; Hoffmann, V.; Albashiti, F.; Thasler, R.; Hagedorn, M.; Louiset, M.-L.; Kopczak, A.; Rösler, J.; Baki, E.; Wunderlich, S. et al.; Kohlmayer, F.; Kuhn, K.; Boeker, M.; Tünnerhoff, J.; Poli, S.; Ziemann, U.; Kohlbacher, O.; Althaus, K.; Müller, S.; Ludolph, A.; Kestler, H.; Mansmann, U.; Dieterich, M.; Kellert, L.: PREDICT-juvenile-stroke: PRospective evaluation of a prediction score determining individual clinical outcome three months after ischemic stroke in young adults - a study protocol. BMC Neurology 23 (1), 2 (2023)
16.
Journal Article
Schüssele, D.; Haller, P.; Haas, M.; Hunter, C.; Sporbeck, K.; Proikas-Cezanne, T.: Autophagy profiling in single cells with open source CellProfiler-based image analysis. Autophagy 19 (1), pp. 338 - 351 (2023)
17.
Journal Article
Krasavin, M.; Bubyrev, A.; Kazantsev, A.; Heim, C.; Maiwald, S.; Zhukovsky, D.; Dar'in, D.; Hartmann, M.; Brunev, A.: Replacing the phthalimide core in thalidomide with benzotriazole. Journal of Enzyme Inhibition and Medicinal Chemistry 37 (1), pp. 527 - 530 (2022)
18.
Journal Article
Lundberg, D.; de Pedro Jové, R.; Na Ayutthaya, P.; Karasov, T.; Shalev, O.; Poersch, K.; Ding, W.; Bollmann-Giolai , A.; Bezrukov, I.; Weigel, D.: Contrasting patterns of microbial dominance in the Arabidopsis thaliana phyllosphere. Proceedings of the National Academy of Sciences of the United States of America 119 (52), e2211881119 (2022)
19.
Journal Article
Ruaud, A.; Pfister, N.; Ley, R.; Youngblut, N.: Interpreting tree ensemble machine learning models with endoR. PLoS Computational Biology 18 (12), e1010714 (2022)
20.
Journal Article
Schulze, S.; Yu, L.; Hua, C.; Zhang, L.; Kolb, D.; Weber, H.; Ehinger, A.; Saile, S.; Stahl, M.; Franz-Wachtel, M. et al.; Lei, L.; El Kasmi, F.; Nürnberger, T.; Cevik, V.; Kemmerling, B.: The Arabidopsis TIR-NBS-LRR protein CSA1 guards BAK1-BIR3 homeostasis and mediates convergence of pattern- and effector-induced immune responses. Cell Host & Microbe 30 (12), pp. 1717 - 1731 (2022)
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