Journal Article (2860)

21.
Journal Article
Kennedy, K.; de Goffau, M.; Perez-Muñoz, M.; Arrieta, M.-C.; Bäckhed, F.; Bork, P.; Braun, T.; Bushman, F.; Dore, J.; de Vos, W. et al.; Earl, A.; Eisen, J.; Elovitz, M.; Ganal-Vonarburg, S.; Gänzle, M.; Garrett, W.; Hall, L.; Hornef, M.; Huttenhower, C.; Konnikova, L.; Lebeer, S.; Macpherson, A.; Massey, R.; McHardy, A.; Koren, O.; Lawley, T.; Ley, R.; O'Mahony, L.; O'Toole, P.; Pamer, E.; Parkhill, J.; Raes, J.; Rattei, T.; Salonen, A.; Segal, E.; Segata, N.; Shanahan, F.; Sloboda, D.; Smith, D.; Sokol, H.; Spector, T.; Surette, M.; Tannock, G.; Walker, A.; Yassour, M.; Walter, J.: Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies. Nature 613 (7945), pp. 639 - 649 (2023)
22.
Journal Article
Pierella Karlusich, J.; Pelletier, E.; Zinger, L.; Lombard, F.; Zingone, A.; Colin, S.; Gasol, J.; Dorrell, R.; Henry, N.; Scalco, E. et al.; Acinas, S.; Wincker, P.; de Vargas, C.; Bowler, S.: A robust approach to estimate relative phytoplankton cell abundances from metagenomes. Molecular Ecology Resources 23 (1), pp. 16 - 40 (2023)
23.
Journal Article
Schönecker, S.; Hoffmann, V.; Albashiti, F.; Thasler, R.; Hagedorn, M.; Louiset, M.-L.; Kopczak, A.; Rösler, J.; Baki, E.; Wunderlich, S. et al.; Kohlmayer, F.; Kuhn, K.; Boeker, M.; Tünnerhoff, J.; Poli, S.; Ziemann, U.; Kohlbacher, O.; Althaus, K.; Müller, S.; Ludolph, A.; Kestler, H.; Mansmann, U.; Dieterich, M.; Kellert, L.: PREDICT-juvenile-stroke: PRospective evaluation of a prediction score determining individual clinical outcome three months after ischemic stroke in young adults - a study protocol. BMC Neurology 23 (1), 2 (2023)
24.
Journal Article
Schüssele, D.; Haller, P.; Haas, M.; Hunter, C.; Sporbeck, K.; Proikas-Cezanne, T.: Autophagy profiling in single cells with open source CellProfiler-based image analysis. Autophagy 19 (1), pp. 338 - 351 (2023)
25.
Journal Article
Krasavin, M.; Bubyrev, A.; Kazantsev, A.; Heim, C.; Maiwald, S.; Zhukovsky, D.; Dar'in, D.; Hartmann, M.; Brunev, A.: Replacing the phthalimide core in thalidomide with benzotriazole. Journal of Enzyme Inhibition and Medicinal Chemistry 37 (1), pp. 527 - 530 (2022)
26.
Journal Article
Lundberg, D.; de Pedro Jové, R.; Na Ayutthaya, P.; Karasov, T.; Shalev, O.; Poersch, K.; Ding, W.; Bollmann-Giolai, A.; Bezrukov, I.; Weigel, D.: Contrasting patterns of microbial dominance in the Arabidopsis thaliana phyllosphere. Proceedings of the National Academy of Sciences of the United States of America 119 (52), e2211881119 (2022)
27.
Journal Article
Ruaud, A.; Pfister, N.; Ley, R.; Youngblut, N.: Interpreting tree ensemble machine learning models with endoR. PLoS Computational Biology 18 (12), e1010714 (2022)
28.
Journal Article
Schulze, S.; Yu, L.; Hua, C.; Zhang, L.; Kolb, D.; Weber, H.; Ehinger, A.; Saile, S.; Stahl, M.; Franz-Wachtel, M. et al.; Lei, L.; El Kasmi, F.; Nürnberger, T.; Cevik, V.; Kemmerling, B.: The Arabidopsis TIR-NBS-LRR protein CSA1 guards BAK1-BIR3 homeostasis and mediates convergence of pattern- and effector-induced immune responses. Cell Host & Microbe 30 (12), pp. 1717 - 1731 (2022)
29.
Journal Article
Weber, R.; Kleemann, L.; Hirschberg, I.; Chung, M.-Y.; Valkov, E.; Igreja, C.: DAP5 enables main ORF translation on mRNAs with structured and uORF-containing 5' leaders. Nature Communications 13 (1), 7510 (2022)
30.
Journal Article
Barnett, S.; Youngblut, N.; Buckley, D.: Bacterial community dynamics explain carbon mineralization and assimilation in soils of different land-use history. Environmental Microbiology 24 (11), pp. 5230 - 5247 (2022)
31.
Journal Article
Brinkmeier, J.; Coelho, S.; de Massy, B.; Bourbon, H.-M.: Evolution and diversity of the TopoVI and TopoVI-like subunits with extensive divergence of the TOPOVIBL subunit. Molecular Biology and Evolution 39 (11), msac227 (2022)
32.
Journal Article
Eenink, B.; Kaminski, T.; Bornberg-Bauer, E.; Jose, J.; Hollfelder, F.; van Loo, B.: Vector redesign and in-droplet cell-growth improves enrichment and recovery in live Escherichia coli. Microbial Biotechnology 15 (11), pp. 2845 - 2853 (2022)
33.
Journal Article
Wibowo, A.; Antunez-Sanchez, J.; Dawson, A.; Price, J.; Meehan, C.; Wrightsman, T.; Collenberg, M.; Bezrukov, I.; Becker, C.; Benhamed, M. et al.; Weigel, D.; Gutierrez-Marcos, J.: Predictable and stable epimutations induced during clonal plant propagation with embryonic transcription factor. PLoS Genetics 18 (11), e1010479 (2022)
34.
Journal Article
Wilhelm, R.; Barnett, S.; Swenson, T.; Youngblut, N.; Koechli, C.; Bowen, P.; Northen, T.; Buckley, D.: Tracing carbon metabolism with stable isotope metabolomics reveals the legacy of diverse carbon sources in soil. Applied and Environmental Microbiology 88 (22), e0083922 (2022)
35.
Journal Article
Berger, J.; Legendre, F.; Zelosko, K.-M.; Harrison, M.; Grandcolas, P.; Bornberg-Bauer, E.; Fouks, B.: Eusocial Transition in Blattodea: Transposable Elements and Shifts of Gene Expression. Genes 13 (11), 1948 (2022)
36.
Journal Article
Singh, J.; Elhabashy, H.; Muthukottiappan, P.; Stepath, M.; Eisenacher, M.; Kohlbacher, O.; Gieselmann, V.; Winter, D.: Cross-linking of the endolysosomal system reveals potential flotillin structures and cargo. Nature Communications 13 (1), 6212 (2022)
37.
Journal Article
Thibau, A.; Vaca, D.; Bagowski, M.; Hipp, K.; Bender, D.; Ballhorn, W.; Linke, D.; Kempf, V.: Adhesion of Bartonella henselae to Fibronectin Is Mediated via Repetitive Motifs Present in the Stalk of Bartonella Adhesin A. Microbiology Spectrum 10 (5), e0211722 (2022)
38.
Journal Article
Welter, D.; Ruaud, A.; Henseler, Z.; De Jong, H.; van Coeverden de Groot, P.; Michaux, J.; Gormezano, L.; Waters, J.; Youngblut, N.; Ley, R.: Free-living psychrophilic bacteria of the genus Psychrobacter are descendants of pathobionts. mSystems (accepted)
39.
Journal Article
Iskhakova, Z.; Zhuravleva, D.; Heim, C.; Hartmann, M.; Laykov , A.; Forchhammer, K.; Kayumov, A.: PotN represents a novel energy-state sensing PII subfamily, occurring in firmicutes. The FEBS Journal 289 (17), pp. 5305 - 5321 (2022)
40.
Journal Article
Sikimić, V.; Herud-Sikimić, O.: Modelling efficient team structures in biology. Journal of Logic and Computation 32 (6), pp. 1109 - 1128 (2022)
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