Scientific Publications

Nattermann, M.; Wenk, S.; Pfister, P.; He, H.; Lee, S.H.; Szymanski, W.; Guntermann, N.; Zhu, F.; Nickel, L.; Wallner, C. et al.; Zarzycki, J.; Paczia, N.; Gaißert, N.; Franciò, G.; Leitner, W.; Gonzalez, R.; Erb, T. J.: Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo. Nature Communications 14 (1), 2682 (2023)

Winiarska, A.; Ramírez-Amador, F.; Hege, D.; Gemmecker, Y.; Prinz, S.; Hochberg, G. K. A.; Heider, J.; Szaleniec, M.; Schuller, J. M.: A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire. Science Advances 9 (22), eadg6689 (2023)

Gehl, M.; Demmer, U.; Ermler, U.; Shima, S.: Crystal structure of FAD-independent methylene-tetrahydrofolate reductase from Mycobacterium hassiacum. Proteins: Structure, Function, and Bioinformatics (2023)

Barsh, G. S.; Butler, G.; Copenhaver, G. P.; Cronsson, S.; Søgaard-Andersen, L.; Stukenbrock, E. H.: Endless microbes most beautiful and most wonderful. PLoS Genetics 19 (4), e1010695 (2023)

Schada v. Borzyskowsi, L.; Schulz-Mirbach, H.; Troncoso Castellanos, M.; Severi, F.; Gomez Coronado, P. A.; Paczia, N.; Glatter, T.; Bar-Even, A.; Lindner, S. N.; Erb, T. J.: Implementation of the β-hydroxyaspartate cycle increases growth performance of Pseudomonas putida on the PET monomer ethylene glycol. Metabolic Engineering 76, pp. 97 - 109 (2023)

Bode, E.; Assmann, D.; Happel, P.; Meyer, E.; Münch, K.; Roessel, N.; Bode, H. B.: easyPACId, a Simple Method for Induced Production, Isolation, Identification, and Testing of Natural Products from Proteobacteria. Bio-protocol 13 (13), p. e4709 (2023)

Izquierdo Martinez, A.; Billini, M.; Miguel-Ruano, V.; Hernández-Tamayo, R.; Richter, P.; Biboy, J.; Batuecas, M. T.; Glatter, T.; Vollmer, W.; Graumann, P. L. et al.; Hermoso, J. A.; Thanbichler, M.: DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus. Nature Communications 14 (1), 4095 (2023)

Bellotto, N.; Agudo-Canalejo, J.; Colin, R.; Golestanian, R.; Malengo, G.; Sourjik, V.: Dependence of diffusion in Escherichia coli cytoplasm on protein size, environmental conditions and cell growth. eLife 11 (2022)

Khera, R.; Mehdipour, A. R.; Bolla, J. R.; Kahnt, J.; Welsch, S.; Ermler, U.; Münke, C.; Robinson, C. V.; Hummer, G.; Xie, H. et al.; Michel, H.: Cryo-EM structures of pentameric autoinducer-2 exporter from Escherichia coli reveal its transport mechanism. The EMBO Journal, e109990 (2022)

Watanabe, T.; Shima, S.: A enzyme complex of methanogenic electron-bifurcating and CO2-fixing enzymes. Bioscience & Industry 80 (2), pp. 122 - 123 (2022)

Lemaire, O. N.; Müller, M.-C.; Kahnt, J.; Wagner, T.: Structural Rearrangements of a Dodecameric Ketol-Acid Reductoisomerase Isolated from a Marine Thermophilic Methanogen. BIOMOLECULES 11 (11), 1679 (2021)

Bouzon, M.; Döring, V.; Dubois, I.; Berger, A.; Stoffel, G. M. M.; Ramirez, L. C.; Meyer, S. N.; Fouré, M.; Roche, D.; Perret, A. et al.; Erb, T. J.; Bar-Even, A.; Lindner, S. N.: Change in cofactor specificity of oxidoreductases by adaptive evolution of an escherichia coli nadph-auxotrophic strain. mBio 12 (4), e00329-21 (2021)

Feyh, R.; Waeber, N. B.; Prinz, S.; Giammarinaro, P. I.; Bange, G.; Hochberg, G. K. A.; Hartmann, R. K.; Altegoer, F.: Structure and mechanistic features of the prokaryotic minimal RNase P. eLife 10, e70160 (2021)

Wong, G. C. L.; Antani, J. D.; Lele, P.; Chen, J.; Nan, B.; Kühn, M. J.; Persat, A.; Bru, J.-L.; Høyland-Kroghsbo, N. M.; Siryaporn, A. et al.; Conrad, J.; Carrara, F.; Yawata, Y.; Stocker, R.; Brun, Y.; Whitfield, G.; Lee, C.; de Anda, J.; Schmidt, W. C.; Golestanian, R.; O'Toole, G. A.; Floyd, K.; Yildiz, F.; Yang, S.; Jin, F.; Toyofuku, M.; Eberl, L.; Nobuhiko, N.; Zacharoff, L.; El-Naggar, M. Y.; Yalcin, S. E.; Malvankar, N.; Rojas-Andrade, M. D.; Hochbaum, A.; Yan, J.; Stone, H. A.; Wingreen, N. S.; Bassler, B.; Wu, Y.; Xu, H.; Drescher, K.; Dunkel, J.: Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation. Physical Biology 18 (5), 051501 (2021)

Davis, B.; Backus, K.; Winter, G.; Chica, R.; Li, D.; Lee, S. Y.; He, C.; Weeks, A.; Overall, C.; Hagihara, S. et al.; Thuronyi, B.; Kamat, S.; Chen, L.-L.; Hurtado Guerrero, R.; Yao, S.; Mahal, L. K.; Voigt, C.; Woo, C.; Strauss, E.; Kikuchi, K.; Dore, T.; Radford, S.; Li, X. D.; Heo, W. D.; Superti-Furga, G.; Deans, T.; Belousov, V.; Matthews, M.; Jackson, C.; Malek, S.; Waldmann, H.; Rising, A.; Jewett, M.; Stamou, D.; Parker, E.; Murakami, M.; Polizzi, K.; Hamachi, I.; Erb, T. J.; Joo, C.; Uesugi, M.; Prinjha, R.; Rechavi, G.; Solano, R.; Schulman, B.; David, Y.; Oslund, R.: Voices of chemical biology. Nature Chemical Biology 17 (1), pp. 1 - 4 (2021)

Pan, H.-J.; Huang, G.; Wodrich, M. D.; Tirani, F. F.; Ataka, K.; Shima, S.; Hu, X.: Diversifying Metal-Ligand Cooperative Catalysis in Semi-Synthetic [Mn]-Hydrogenases. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 60 (24), pp. 13350 - 13357 (2021)

Scheffen, M.; Marchal, D. G.; Beneyton, T.; Schuller, S.K.; Klose, M.; Diehl, C.; Lehmann, J.; Pfister, P.; Carillo, M.; He, H. et al.; Aslan, S.; Cortina, N. S.; Claus, P.; Bollschweiler, D.; Baret, J.-C.; Schuller, J.M.; Zarzycki, J.; Bar-Even, A.; Erb, T. J.: A new-to-nature carboxylation module to improve natural and synthetic CO2 fixation. Nature Catalysis 4, pp. 105 - 115 (2021)

Watanabe, T.; Pfeil-Gardiner, O.; Kahnt, J.; Koch, J.; Shima, S.; Murphy, B. J.: Three-megadalton complex of methanogenic electron-bifurcating and CO2-fixing enzymes. SCIENCE 373 (6559), pp. 1151 - 1155 (2021)

Watanabe, T.; Shima, S.: MvhB-type Polyferredoxin as an Electron-transfer Chain in Putative Redox-enzyme Complexes. CHEMISTRY LETTERS 50 (2), pp. 353 - 360 (2021)

Shima, S.; Huang, G.; Wagner, T.; Ermler, U.: Structural Basis of Hydrogenotrophic Methanogenesis. Annual Review of Microbiology 74, pp. 713 - 733 (2020)