Scientific Publications

Bakker, J.; Boinot, M.; Schann, K.; Kahnt, J.; Glatter, T.; Erb, T. J.; Nattermann, M.; Wenk, S.: Evolution-assisted engineering of formate assimilation via the formyl phosphate route in Escherichia coli. Metabolic Engineering 93, pp. 208 - 217 (2026)

Chen, H.; Zuo, J.; Wang, Y.; Li, T.; Bai, C.; Fernie, A. R.; Wang, R.; Shi, Y.; Tao, J.; Feng, X. et al.; Ren, Y.; Wang, L.; Zheng, Y.: Effects of low-voltage electrostatic field on post-harvest sugar metabolism and stress resistance in sweet corn. Postharvest Biology and Technology 231, 113859 (2026)

Covell, L.; Machado, M.; Vaz, M.G.M.V.; Martins, A.O.; Monte Bello, C.C.; Mubeen, U.; Rocha, D.N.; Martins, M.A.; Caldana, C.; Araújo, W.L. et al.; Nunes-Nesi, A.: Differential metabolic reprogramming due to nitrogen starvation leads to remobilization of storage metabolites in microalgal strains. Journal of Biotechnology 409, pp. 231 - 246 (2026)

Nakamura, M.; Bente, H.; Derkacheva, M.; Gentry, M.; Landberg, K.; Thelander, M.; Sundberg, E.; Hennig, L.; Köhler, C.: Chromatin-associated DEK proteins maintain H3K27me3 balance and coordinate developmental transitions in plants. New Phytologist 249 (2), pp. 930 - 944 (2026)

Zhang, Y.; Fernie, A. R.: Nanocoated bacteria for sustainable fertilization. nature food (2026)

Deng, R.; Chen, X.; Fernie, A. R.; Zhang, Y.: Scalable AI-driven protein engineering with AiCE. Molecular Plant 18 (12), pp. 2054 - 2056 (2025)

Doghri, M.; Rodríguez, V.; Erban, A.; Alcántara-Enguidános, A.; Rosa-Téllez, S.; Kopka, J.; Renau-Morata, B.; Ros, R.: Increasing temperatures and CO2 impact on primary and specialized metabolism of Brassica species. PLANT STRESS 18, 101083 (2025)

Fàbregas, N.; Yoshida, T.; Fernie, A. R.: Bidirectional crosstalk between plant hormone signaling and metabolism. Plant Physiology, kiaf630 (2025)

Feng, X.; Meng, D.; Wang, Y.; Fernie, A. R.; Bai, C.; He, X.; Tao, J.; Zhou, X.; Ren, Y.; Zuo, J. et al.; Zheng, Y.: Chlorine dioxide affects metabolism of harvested cauliflower. Postharvest Biology and Technology 230, 113735 (2025)

Fernie, A. R.: Spotlight on “Proximity proteomics reveals a mechanism of fatty acid transfer at lipid droplet-mitochondria- endoplasmic reticulum contact sites” by Bezawork-Geleta et al. 2025. Journal of Mitochondria, Plastids and Endosymbiosis 3 (1), 2493930 (2025)

Fernie, A. R.; Timm, S.: Differing metabolic responses of guard cells to blue light. New Phytologist 248 (5), pp. 2184 - 2186 (2025)

Kuhalskaya, A.; Li, X.; Lee, J.; Gonda, I.; von Steimker, J.; Bulut, M.; Karakas, E.; Fisher, J.; Krämer, K.; Rosental, L. et al.; Wijesingha Ahchige, M.; Garbowicz, K.; Klemmer, A.; Ruß, A.-K.; Donath, A.; Cuadros-Inostroza, A.; Boerjan, W.; Tieman, D. M.; Zamir, D.; Klee, H. J.; Alseekh, S.: Genetic architecture of the tomato fruit lipidome. PNAS Nexus, pgaf401 (2025)

Lopes, A.; Sandoval-Ibanez, O.; Arrivault, S.; Rolo, D.; Loiacono, F.V.; Erban, A.; Karcher, D.; Obst, S.; Ruf, S.; Kopka, J. et al.; Bock, R.: Plastid Engineering for Photosynthesis-Driven Synthesis of Hyaluronic Acid in Tobacco. Plant Biotechnology Journal (2025)

Moratti, F. G.; Lonoce, C.; Obst, S.; Kroop, X.; Karcher, D.; Ruf, S.; Bock, R.: A Set of Intein-Split Selectable Marker Genes for Efficient Co-Transformation. Plant Biotechnology Journal (2025)

Østerlund, I.; Nyboe Ørting, S.; Leverett, A.; Théroux-Rancourt, G.; Ebrahimi, S.; Wang, Y.; Nikoloski, Z.; Kromdijk, J.; Persson, S.: Rho GTPase overexpression impacts leaf internal architecture and mesophyll conductance in Arabidopsis. New Phytologist 248 (6), pp. 3053 - 3066 (2025)

Sánchez de Medina-Hernández, V.; Nava-García, M.M.; Bianchi, A.; Clavel, M.; Papareddy, R.K.; Benchalel, L.; Andreev, V.I.; Mathur, V.; Mohseni, A.; Garcia-León, M. et al.; Gao, P.; de la Concepción, J.C.; Picchianti, L.; Grujic, N.; Kobylinska, R.; Abdrakhmanov, A.; Duverge, H.; Anand, G.; Leibrock, N.; Ma, J.; Raffeiner, M.; Crawford, T.S.; Argirò, L.; Matuszkiewicz, M.; Wun, C.-L.; Kanne, J.V.; Meinhart, A.; Roitinger, E.; Bäurle, I.; Kang, B.H.; Petersen, M.; Üstün, S.; Kulathu, Y.; Clausen, T.; Ramundo, S.; Dagdas, Y.: Cross-species interactome analysis uncovers a conserved selective autophagy mechanism for protein quality control in plants. Developmental Cell (2025)

Satanowski, A.; Marchal, D.G.; Perret, A.; Petit, J.-L.; Bouzon, M.; Döring, V.; Dubois, I.; He, H.; Smith, E.N.; Pellouin, V. et al.; Petri, H.M.; Rainaldi, V.; Nattermann, M.; Burgener, S.; Paczia, N.; Zarzycki, J.; Heinemann, M.; Bar-Even, A.; Erb, T.J.: Design and implementation of aerobic and ambient CO2-reduction as an entry-point for enhanced carbon fixation. Nature Communications 16 (1), 3134 (2025)

Wang, Y.; Guan, Z.; Wang, Q.; Wang, H.; Yin, X.; Zhu, Z.; Gong, Z.; Qin, Y.; Fernie, A. R.; Deng, X. et al.; Zhu, F.; Yin, P.; Cheng, Y.: Structural basis of VLCFA chain-length determination by the KCS6-CER2 complex in plants. Science Advances 11 (51), eadz9463 (2025)

Zhu, Q.; Van de Velde, S.; Wijnants, S.; Carolus, H.; Jacobs, S.; Sofras, D.; Vandecruys, P.; Van Goethem, O.; Feil, R.; Vergauwen, R. et al.; Van Genechten, W.; Van den Ende, W.; Rybak, J. M.; Himmelreich, U.; Lunn, J. E.; Van Dijck, P.: Accumulation of Trehalose 6-Phosphate in Candidozyma auris results in Decreased Echinocandin Resistance and Tolerance. Nature Communications (2025)

Arrivault, S.; Medeiros, D.B.; Sales, C. R. G.; Guenther, M.; Kromdijk, J.; Fernie, A. R.; Stitt, M.: Metabolite profiling reveals slow and uncoordinated adjustment of C4 photosynthesis to sudden changes in irradiance. Plant Physiology 199 (3), kiaf508 (2025)