Scientific Publications

Abasolo, W.; Eder, M.; Yamauchi, K.; Obel, N.; Reinecke, A.; Neumetzler, L.; Dunlop, J. W. C.; Mouille, G.; Pauly, M.; Hofte, H. et al.; Burgert, I.: Pectin May Hinder the Unfolding of Xyloglucan Chains during Cell Deformation: Implications of the Mechanical Performance of Arabidopsis Hypocotyls with Pectin Alterations. Molecular Plant 2 (5), pp. 990 - 999 (2009)

Afzal, A. J.; Natarajan, A.; Saini, N.; Iqbal, M. J.; Geisler, M.; El Shemy, H. A.; Mungur, R.; Willmitzer, L.; Lightfoot, D. A.: The Nematode Resistance Allele at the rhg1 Locus Alters the Proteome and Primary Metabolism of Soybean Roots. Plant Physiology 151 (3), pp. 1264 - 1280 (2009)

Ahlert, D.; Stegemann, S.; Kahlau, S.; Ruf, S.; Bock, R.: Insensitivity of chloroplast gene expression to DNA methylation. Molecular Genetics and Genomics 282 (1), pp. 17 - 24 (2009)

Allwood, J. W.; Erban, A.; de Koning, S.; Dunn, W. B.; Lüdemann, A.; Lommen, A.; Kay, L.; Loscher, R.; Kopka, J.; Goodacre, R.: Inter-laboratory reproducibility of fast gas chromatography-electron impact-time of flight mass spectrometry (GC-EI-TOF/MS) based plant metabolomics. Metabolomics 5 (4), pp. 479 - 496 (2009)

Andorf, S.; Gaertner, T.; Steinfath, M.; Witucka-Wall, H.; Altmann, T.; Repsilber, D.: Towards Systems Biology of Heterosis: A Hypothesis about Molecular Network Structure Applied for the Arabidopsis Metabolome. EURASIP Journal on Bioinformatics and Systems Biology, p. 147157 (2009)

Angelovici, R.; Fait, A.; Zhu, X. H.; Szymanski, J.; Feldmesser, E.; Fernie, A. R.; Galili, G.: Deciphering Transcriptional and Metabolic Networks Associated with Lysine Metabolism during Arabidopsis Seed Development. Plant Physiology 151 (4), pp. 2058 - 2072 (2009)

Apel, W.; Bock, R.: Enhancement of Carotenoid Biosynthesis in Transplastomic Tomatoes by Induced Lycopene-to-Provitamin A Conversion. Plant Physiology 151 (1), pp. 59 - 66 (2009)

Armengaud, P.; Sulpice, R.; Miller, A. J.; Stitt, M.; Amtmann, A.; Gibon, Y.: Multilevel Analysis of Primary Metabolism Provides New Insights into the Role of Potassium Nutrition for Glycolysis and Nitrogen Assimilation in Arabidopsis Roots. Plant Physiology 150 (2), pp. 772 - 785 (2009)

Armengaud, P.; Zambaux, K.; Hills, A.; Sulpice, R.; Pattison, R. J.; Blatt, M. R.; Amtmann, A.: EZ-Rhizo: integrated software for the fast and accurate measurement of root system architecture. The Plant Journal 57 (5), pp. 945 - 956 (2009)

Arrivault, S.; Guenther, M.; Ivakov, A.; Feil, R.; Vosloh, D.; van Dongen, J. T.; Sulpice, R.; Stitt, M.: Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations. Plant Journal 59 (5), pp. 824 - 839 (2009)

Baessler, O. Y.; Weiss, J.; Wienkoop, S.; Lehmann, K.; Scheler, C.; Dolle, S.; Schwarz, D.; Franken, P.; George, E.; Worm, M. et al.; Weckwerth, W.: Evidence for Novel Tomato Seed Allergens: IgE-Reactive Legumin and Vicilin Proteins Identified by Multidimensional Protein Fractionation-Mass Spectrometry and in Silico Epitope Modeling. Journal of Proteome Research 8 (3), pp. 1111 - 1122 (2009)

Barratt, D. H. P.; Derbyshire, P.; Findlay, K.; Pike, M.; Wellner, N.; Lunn, J.; Feil, R.; Simpson, C.; Maule, A. J.; Smith, A. M.: Normal growth of Arabidopsis requires cytosolic invertase but not sucrose synthase. Proceedings of the National Academy of Sciences of the United States of America 106 (31), pp. 13124 - 13129 (2009)

Baruah, A.; Simkova, K.; Hincha, D. K.; Apel, K.; Laloi, C.: Modulation of O-1(2)-mediated retrograde signaling by the PLEIOTROPIC RESPONSE LOCUS 1 (PRL1) protein, a central integrator of stress and energy signaling. The Plant Journal 60 (1), pp. 22 - 32 (2009)

Bischoff, V.; Cookson, S. J.; Wu, S.; Scheible, W.-R.: Thaxtomin A affects CESA-complex density, expression of cell wall genes, cell wall composition, and causes ectopic lignification in Arabidopsis thaliana seedlings. Journal of Experimental Botany 60 (3), pp. 955 - 965 (2009)

Bleidorn, C.; Podsiadlowski, L.; Zhong, M.; Eeckhaut, I.; Hartmann, S.; Halanych, K. M.; Tiedemann, R.: On the phylogenetic position of Myzostomida: can 77 genes get it wrong? BMC Evolutionary Biology 9, p. 150 (2009)

Bortesi, L.; Rossato, M.; Schuster, F.; Raven, N.; Stadlmann, J.; Avesani, L.; Falorni, A.; Bazzoni, F.; Bock, R.; Schillberg, S. et al.; Pezzotti, M.: Viral and murine interleukin-10 are correctly processed and retain their biological activity when produced in tobacco. BMC Biotechnology 9, p. 22 (2009)

Brautigam, K.; Dietzel, L.; Kleine, T.; Stroher, E.; Wormuth, D.; Dietz, K. J.; Radke, D.; Wirtz, M.; Hell, R.; Doermann, P. et al.; Nunes-Nesi, A.; Schauer, N.; Fernie, A. R.; Oliver, S. N.; Geigenberger, P.; Leister, D.; Pfannschmidt, T.: Dynamic Plastid Redox Signals Integrate Gene Expression and Metabolism to Induce Distinct Metabolic States in Photosynthetic Acclimation in Arabidopsis. The Plant Cell 21 (9), pp. 2715 - 2732 (2009)

Bulik, S.; Grimbs, S.; Huthmacher, C.; Selbig, J.; Holzhuetter, H. G.: Kinetic hybrid models composed of mechanistic and simplified enzymatic rate laws - a promising method for speeding up the kinetic modelling of complex metabolic networks. FEBS Journal 276 (2), pp. 410 - 424 (2009)

Cheng, F. X.; Hartmann, S.; Gupta, M.; Ibrahim, J. G.; Vision, T. J.: A hierarchical model for incomplete alignments in phylogenetic inference. Bioinformatics 25 (5), pp. 592 - 598 (2009)

Childs, L.; Nikoloski, Z.; May, P.; Walther, D.: Identification and classification of ncRNA molecules using graph properties. Nucleic Acids Research 37 (9), p. e66 (2009)