Publications in Yearbook 2018

Yearbook

Journal Article

  1. 1.
    Alber, M.; Kalscheuer, V. M.; Marco, E.; Sherr, E.; Lesca, G.; Till, M.; Gradek, G.; Wiesener, A.; Korenke, C.; Mercier, S. et al.; Becker, F.; Yamamoto, T.; Scherer, S. W.; Marshall, C. R.; Walker, S.; Dutta, U. R.; Dalal, A. B.; Suckow, V.; Jamali, P.; Kahrizi, K.; Najmabadi, H.; Minassian, B. A.: ARHGEF9 disease: Phenotype clarification and genotype-phenotype correlation. Neurology Genetics (2017)
  2. 2.
    Andrey, G.; Schöpflin, R.; Jerković, I.; Heinrich, V.; Ibrahim, D.; Paliou, C.; Hochradel, M.; Timmermann, B.; Haas, S.; Vingron, M. et al.; Mundlos, S.: Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding. Genome Research 27 (2), pp. 223 - 233 (2017)
  3. 3.
    Auburger, G.; Sen, N.-E.; Meierhofer, D.; Başak, A.-N.; Gitler, A. D.: Efficient Prevention of Neurodegenerative Diseases by Depletion of Starvation Response Factor Ataxin-2. Trends in Neurosciences 40 (8), pp. 507 - 516 (2017)
  4. 4.
    Baek, J. Y.; Geissner, A.; Rathwell, D. C. K.; Meierhofer, D.; Pereira, C. L.; Seeberger , P.: A modular synthetic route to size-defined immunogenic Haemophilus influenzae b antigens is key to the identification of an octasaccharide lead vaccine candidate. Chemical Science 9 (5), pp. 1279 - 1288 (2018)
  5. 5.
    Baskin, K. K.; Makarewich, C. A.; DeLeon, S. M.; Ye, W.; Chen, B.; Beetz, N.; Schrewe, H.; Bassel-Duby, R.; Olson, E. N.: MED12 regulates a transcriptional network of calcium-handling genes in the heart. JCI Insight (2017)
  6. 6.
    Bhat, J.; Helmuth, J.; Chitadze, G.; Kouakanou, L.; Peters, C.; Vingron, M.; Ammerpohl, O.; Kabelitz, D.: Stochastics of Cellular Differentiation Explained by Epigenetics: The Case of T-Cell Differentiation and Functional Plasticity. Scand J Immunol 86 (4), pp. 184 - 195 (2017)
  7. 7.
    Binder, H.; Hopp, L.; Schweiger, M. R.; Hoffmann, S.; Jühling, F.; Kerick, M.; Timmermann, B.; Siebert, S.; Grimm, C.; Nersisyan, L. et al.; Arakelyan, A.; Herberg, M.; Buske, P.; Loeffler-Wirth, H.; Rosolowski, M.; Engel, C.; Przybilla, J.; Peifer, M.; Friedrichs, N.; Moeslein, G.; Odenthal, M.; Hussong, M.; Peters, S.; Holzapfel, S.; Nattermann, J.; Hueneburg, R.; Schmiegel, W.; Royer-Pokora, B.; Aretz, S.; Kloth, M.; Kloor, M.; Buettner, R.; Galle, J.; Loeffler, M.: Genomic and transcriptomic heterogeneity of colorectal tumors arising in Lynch Syndrome. The Journal of Pathology: an Official Journal of the Pathological Society of Great Britain and Ireland 243 (2), pp. 242 - 254 (2017)
  8. 8.
    Birth, P.; Schöne, S.; Stelzl, U.; Meijsing, S. H.: Identification and characterization of BATF3 as a context-specific coactivator of the glucocorticoid receptor. PLoS One 12 (7), e0181219 (2017)
  9. 9.
    Carroll, R.; Kumar, R.; Shaw, M.; Slee, J.; Kalscheuer, V.; Corbett, M. A.; Gecz, J.: Variant in the X-chromosome spliceosomal gene GPKOW causes male-lethal microcephaly with intrauterine growth restriction. European journal of human genetics 25 (9), pp. 1078 - 1082 (2017)
  10. 10.
    Cauchy, P.; Koch, F.; Andrau, J.-C.: Two possible modes of pioneering associated with combinations of H2A.Z and p300/CBP at nucleosome-occupied enhancers. Transcription 8 (3), pp. 179 - 184 (2017)
  11. 11.
    Choi, J.; Huebner, A. J.; Clement, K.; Walsh, R. M.; Savol, A.; Lin, K.; Gu, H.; Di Stefano, B.; Brumbaugh, J.; Kim, S.-Y. et al.; Sharif, J.; Rose, C. M.; Mohammad, A.; Odajima, J.; Charron, J.; Shioda, T.; Gnirke, A.; Gygi, S.; Koseki, H.; Sadreyev, R. I.; Xiao, A.; Meissner, A.; Hochedlinger, K.: Prolonged Mek1/2 suppression impairs the developmental potential of embryonic stem cells. Nature 548 (7666), pp. 219 - 223 (2017)
  12. 12.
    Choi, J.; Clement, K.; Huebner, A. J.; Webster, J.; Etchegaray, J.-P.; Gu, H.; Boyle, P.; Elling, U.; Mostoslavsky, R.; Sadreyev, R. et al.; Park, P. J.; Gygi, S. P.; Meissner, A.; Hochedlinger, K.: DUSP9 Modulates DNA Hypomethylation in Female Mouse Pluripotent Stem Cells. Cell Stem Cell 20 (5), pp. 706 - 719 (2017)
  13. 13.
    Corwin, T.; Woodsmith, J.; Apelt, F.; Fontaine, J.-F.; Meierhofer, D.; Helmuth, J.; Grossmann, A.; Andrade-Navarro, M. A.; Ballif, B. A.; Stelzl, U.: Defining Human Tyrosine Kinase Phosphorylation Networks Using Yeast as an In Vivo Model Substrate. Cell Systems (2017)
  14. 14.
    Ehmke, N.; Graul-Neumann, L.; Smorag, L.; Koenig, R.; Segebrecht, L.; Magoulas, P.; Scaglia, F.; Kilic, E.; Hennig, A. F.; Adolphs, N. et al.; Saha, N.; Fauler, B.; Kalscheuer, V. M.; Hennig, F.; Altmüller, J.; Netzer, C.; Thiele, H.; Nürnberg, P.; Yigit, G.; Jäger, M.; Hecht, J.; Krüger, U.; Mielke, T.; Krawitz, P. M.; Horn, D.; Schuelke, M.; Mundlos, S.; Bacino, C. A.; Bonnen, P. E.; Wollnik, B.; Fischer-Zirnsak, B.; Kornak, U.: De Novo Mutations in SLC25A24 Cause a Craniosynostosis Syndrome with Hypertrichosis, Progeroid Appearance, and Mitochondrial Dysfunction. The American Journal of Human Genetics 101 (5), pp. 833 - 843 (2017)
  15. 15.
    Gardner, E. J.; Lam, V. K.; Harris, D. N.; Chuang, N. T.; Scott, E. C.; Pittard, W. S.; Mills, R. E.; 1000 Genomes Project, C.; Timmermann, B.; Devine, S. E.: The Mobile Element Locator Tool (MELT): Population-scale mobile element discovery and biology. Genome Research 27 (11), pp. 1916 - 1929 (2017)
  16. 16.
    Golob-Schwarzl, N.; Schweiger, C.; Koller, C.; Krassnig, S.; Gogg-Kamerer, M.; Gantenbein, N.; Toeglhofer, A. M.; Wodlej, C.; Bergler, H.; Pertschy, B. et al.; Uranitsch, S.; Holter, M.; El-Heliebi, A.; Fuchs, J.; Punschart, A.; Stiegler, P.; Keil, M.; Hoffmann, J.; Henderson, D.; Lehrach, H.; Reinhard, C.; Regenbrecht, C.; Schicho, R.; Fickert, P.; Lax, S.; Haybaeck, J.: Separation of low and high grade colon and rectum carcinoma by eukaryotic translation initiation factors 1, 5 and 6. Oncotarget (2017)
  17. 17.
    Hector, R. D.; Kalscheuer, V. M.; Hennig, F.; Leonard, H.; Downs, J.; Clarke, A.; Benke, T. A.; Armstrong, J.; Pineda, M.; Bailey, M. E. S. et al.; Cobb, S. R.: CDKL5 variants: Improving our understanding of a rare neurologic disorder. Neurology Genetics (2017)
  18. 18.
    Heller, D.; Krestel, R.; Ohler, U.; Vingron, M.; Marsico, A.: ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data. Nucleic Acids Research (London) 45 (19), pp. 11004 - 11018 (2017)
  19. 19.
    Herdt, O.; Neumann, A.; Timmermann, B.; Heyd, F.: The cancer-associated U2AF35 470A>G (Q157R) mutation creates an in-frame alternative 5’ splice site that impacts on splicing regulation in Q157R patients. RNA (2017)
  20. 20.
    Hoehe, M. R.; Herwig, R.; Mao, Q.; Peters, B. A.; Drmanac, R.; Church, G. M.; Huebsch, T.: Significant abundance of cis configurations of mutations in diploid human genomes. bioRxiv (2017)
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