Wissenschaftliche Publikationen

Zeke, A.; Bastys, T.; Alexa, A.; Garai, Á.; Mészáros, B.; Kirsch, K.; Dosztányi, Z.; Kalinina, O. V.; Reményi, A.: Systematic Discovery of Linear Binding Motifs Targeting an Ancient Protein Interaction Surface on MAP Kinases. Molecular Systems Biology 11 (11), 837, S. 1 - 29 (2015)

Dirnberger, M.; Kehl, T.; Neumann, A.: NEFI: Network Extraction From Images. Scientific Reports 5, 15669 (2015)

He, X.; Cicek, A. E.; Wang, Y.; Schulz, M. H.; Le, H.-S.; Bar-Joseph, Z.: De Novo ChIP-seq Analysis. Genome Biology 16 (1), 205 (2015)

Bellitto, T.; Marschall, T.; Schönhuth, A.; Klau, G. W.: Next Generation Cluster Editing. PeerJ PrePrints 3, e1599 (2015)

Feldmann, A.; Pfeifer, N.: From Predicting to Analyzing HIV-1 Resistance to Broadly Neutralizing Antibodies. PeerJ Preprints 3, e1304v1 (2015)

Cheaib, M.; Dehghani Amirabad, A.; Nordström, K. J. V.; Schulz, M. H.; Simon, M.: Epigenetic regulation of serotype expression antagonizes transcriptome dynamics in Paramecium tetraurelia. DNA Research 22 (4), S. 293 - 305 (2015)

Vangorp, P.; Myszkowski, K.; Graf, E.; Mantiuk, R.: An Empirical Model for Local Luminance Adaptation in the Fovea (Oral Presentation). Perception 44 (S1), 1T3C001, S. 98 - 98 (2015)

Ramiadantsoa, T.; Ovaskainen, O.; Rybicki, J.; Hanski, I.: Large-scale Habitat Corridors for Biodiversity Conservation: A Forest Corridor in Madagascar. PLoS ONE 10 (7), e0132126 (2015)

Mueller, S. C.; Backes, C.; Kalinina, O. V.; Meder, B.; Stöckel, D.; Lenhof, H.-P.; Meese, E.; Keller, A.: BALL-SNP: Combining Genetic and Structural Information to Identify Candidate non-Synonymous Single Nucleotide Polymorphisms. Genome Medicine 7 (1), 65 (2015)

Abreu, V. A. C.; Almeida, S.; Tiwari, S.; Hassan, S. S.; Mariano, D.; Silva, A.; Baumbach, J.; Azevedo, V.; Röttger, R.: CMRegNet -- An Interspecies Reference Database for Corynebacterial and Mycobacterial Regulatory Networks. BMC Genomics 16 (1), 452 (2015)

Hauschild, A.-C.; Frisch, T.; Baumbach, J. I.; Baumbach, J.: Carotta: Revealing Hidden Confounder Markers in Metabolic Breath Profiles. Metabolites 5 (2), S. 344 - 363 (2015)

Ebert, P.; Müller, F.; Nordström, K.; Lengauer, T.; Schulz, M. H.: A General Concept for Consistent Documentation of Computational Analyses. Database 2015, bav050 (2015)

Ernst, P.; Siu, A.; Weikum, G.: KnowLife: A Versatile Approach for Constructing a Large Knowledge Graph for Biomedical Sciences. BMC Bioinformatics 16 (1), 157 (2015)

Sierra, S.; Dybowski, J. N.; Pironti, A.; Heider, D.; Güney, L.; Thielen, A.; Reuter, S.; Esser, S.; Fätkenheuer, G.; Lengauer, T. et al.; Hoffmann, D.; Pfister, H.; Jensen, B.; Kaiser, R.: Parameters Influencing Baseline HIV-1 Genotypic Tropism Testing Related to Clinical Outcome in Patients on Maraviroc. PLoS ONE 10 (5), e0125502 (2015)

Loetscher, T.; Chen, C.; Wignall, S.; Bulling, A.; Hoppe, S.; Churches, O.; Thomas, N. A.; Nicholls, M. E. R.; Lee, A.: A Study on the Natural History of Scanning Behaviour in Patients with Visual Field Defects after Stroke. BMC Neurology 15, 64 (2015)

Andreassen, O. A.; Desikan, R. S.; Wang, Y.; Thompson, W. K.; Schork, A. J.; Zuber, V.; Doncheva, N. T.; Ellinghaus, E.; Albrecht, M.; Mattingsdal, M. et al.; Franke, A.; Lie, B. A.; Mills, I.; Aukrust, P.; McEvoy, L. K.; Djurovic, S.; Karlsen, T. H.; Dale, A. M.: Abundant Genetic Overlap between Blood Lipids and Immune-Mediated Diseases Indicates Shared Molecular Genetic Mechanisms. PLoS ONE 10 (4), e0123057 (2015)

Leung, W. Y.; Marschall, T.; Paudel, Y.; Falquet, L.; Mei, H.; Schönhuth, A.; Maoz, T. Y.: SV-AUTOPILOT: Optimized, Automated Construction of Structural Variation Discovery and Benchmarking Pipelines. BMC Genomics 16 (1), 238 (2015)

Lawyer, G.: Understanding the Influence of All Nodes in a Network. Scientific Reports 5, 8665 (2015)

Lengauer, T.; Nussinov, R.: How to Write a Presubmission Inquiry. PLoS Computational Biology 11 (2), e1004098 (2015)

Döring, M.; Gasparoni, G.; Gries, J.; Nordström, K.; Lutsik, P.; Walter, J.; Pfeifer, N.: Identification and Analysis of Methylation Call Differences Between Bisulfite Microarray and Bisulfite Sequencing Data with Statistical Learning Techniques. BMC Bioinformatics 16 (Suppl 3), A7 (2015)