Grabarse, W.; Mahlert, F.; Duin, E. C.; Goubeaud, M.; Shima, S.; Thauer, R. K.; Lamzin, V.; Ermler, U.: On the mechanism of biological methane formation: structural evidence for conformational changes in methyl-coenzyme M reductase upon substrate binding. Journal of Molecular Biology (London) 309 (1), S. 315 - 330 (2001)

Grabarse, W.; Mahlert, F.; Shima, S.; Thauer, R. K.; Ermler, U.: Comparison of three methyl-coenzyme M reductases from phylogenetically distant organisms: unusual amino acid modification, conservation and adaptation. Journal of Molecular Biology (London) 303 (2), S. 329 - 344 (2000)

Shima, S.; Warkentin, E.; Grabarse, W.; Sordel, M.; Wicke, M.; Thauer, R. K.; Ermler, U.: Structure of coenzyme F₄₂₀ dependent methylenetetrahydromethanopterin reductase from two methanogenic archaea. Journal of Molecular Biology (London) 300 (4), S. 935 - 950 (2000)

Selmer, T.; Kahnt, J.; Goubeaud, M.; Shima, S.; Grabarse, W.; Ermler, U.; Thauer, R. K.: The Biosynthesis of Methylated Amino Acids in the Active Site Region of Methyl-coenzyme M Reductase. The Journal of Biological Chemistry 275 (6), S. 3755 - 3760 (2000)

Grabarse, W.; Vaupel, M.; Vorholt, J. A.; Shima, S.; Thauer, R. K.; Wittershagen, A.; Bourenkov, G.; Bartunik, H. D.; Ermler, U.: The crystal structure of methenyltetrahydromethanopterin cyclohydrolase from the hyperthermophilic archaeon Methanopyrus kandleri. Structure 7 (10), S. 1257 - 1268 (1999)

Karamanos, Y.; Singer, M.; Sogaard-Andersen, L.: 25th International Conference on the Biology of the Myxobacteria. Molecular Microbiology 31 (6), S. 1863 - 1869 (1999)

Ermler, U.; Grabarse, W.; Shima, S.; Goubeaud, M.; Thauer, R. K.: Active sites of transition-metal enzymes with a focus on nickel. Current Opinion in Structural Biology 8 (6), S. 749 - 758 (1998)

Shima, S.; Tziatzios, C.; Schubert, D.; Fukada, H.; Takahashi, K.; Ermler, U.; Thauer, R. K.: Lyotropic‐salt‐induced changes in monomer/dimer/tetramer association equilibrium of formyltransferase from the hyperthermophilic Methanopyrus kandleri in relation to the activity and thermostability of the enzyme. European Journal of Biochemistry 258 (1), S. 85 - 92 (1998)

Givskov, M.; Sogaard-Andersen, L.: Kommunikation hos bakterier. Naturens verden (6), S. 207 - 216 (1998)

Shima, S.: Unique structures of the enzymes from methanogens. Seibutsu-Kogaku Kaishi (76), 353 (1998)

Ermler, U.; Grabarse, W.; Shima, S.; Goubeaud, M.; Thauer, R. K.: Crystal structure of methyl-coenzyme M reductase: the key enzyme of biological methane formation. Science 278 (5342), S. 1457 - 1462 (1997)

Ermler, U.; Merckel, M. C.; Thauer, R. K.; Shima, S.: Formylmethanofuran: tetrahydromethanopterin formyltransferase from Methanopyrus kandleri — new insights into salt-dependence and thermostability. Structure 5 (5), S. 635 - 646 (1997)

Shima, S.; Goubeaud, M.; Vinzenz, D.; Thauer, R. K.; Ermler, U.: Crystallization and preliminary X-ray diffraction studies of methyl-coenzyme M reductase from methanobacterium thermoautotrophicum. Journal of Biochemistry 121 (5), S. 829 - 830 (1997)

Shima, S.; Thauer, R. K.; Michel, H.; Ermler, U.: Crystallization and preliminary X‐ray diffraction studies of formylmethanofuran: Tetrahydromethanopterin formyltransferase from Methanopyrus kandleri. Proteins: Structure, Function, and Bioinformatics 26 (1), S. 118 - 120 (1996)

Suzuki, K.; Shima, S.: Hydrogenobacter acidophilus: Is its ancestor a missing-link between the Bacteria and the Archaea? RIKEN review (3), S. 3 - 4 (1993)

Shima, S.: Cellulases of clostridia: genetics and biochemistry. The Heredity (43), S. 56 - 60 (1993)

Shima, S.: Production of organic materials by electric energy: Utilization of hydrogen bacteria. Nogyodenka (43), S. 13 - 16 (1990)

Shima, S.: Application of energy-conversion enzymes for hydrogen production and electrodes of fuel cells. Energy forum No. 432 (112) (1990)

Shima, S.: Utilization of root-nodule bacteria and its ecological problems. Nogyodenka (38), S. 15 - 17 (1985)

Perez-Burgos, M.; Sogaard-Andersen, L.: Regulation by c-di-GMP in Myxococcus xanthus. In: Microbial cyclic di-nucleotide signaling, S. 293 - 310 (Hg. Chou, S.-H.; Giuliani, N.; Lee, V. T.; Römling, U.). Springer, Cham. (2020)