Scientific Publications

Schütze, T.; Wilhelm, B.; Greiner, N.; Braun, H.; Peter, F.; Mörl, M.; Erdmann, V. A.; Lehrach, H.; Konthur, Z.; Menger, M. et al.; Arndt, P. F.; Glökler, J.: Probing the SELEX Process with Next-Generation Sequencing. PLoS ONE 6 (12), e29604 (2011)

Mayr, J. A.; Zimmermann, F. A.; Fauth, C.; Bergheim, C.; Meierhofer, D.; Radmayr, D.; Zschocke, J.; Koch, J.; Sperl, W.: Lipoic acid synthetase deficiency causes neonatal-onset epilepsy, defective mitochondrial energy metabolism, and glycine elevation. The American Journal of Human Genetics 89 (6), pp. 792 - 797 (2011)

Meinel, T.; Schweiger, M. R.; Ludewig, A. H.; Chenna, R.; Krobitsch, S.; Herwig, R.: Ortho2ExpressMatrix--a web server that interprets cross-species gene expression data by gene family information. BMC Genomics 12, 12:483 (2011)

Adrover, M. À.; Zi, Z.; Duch, A.; Schaber, J.; González-Novo, A.; Jimenez, J.; Nadal-Ribelles, M.; Clotet, J.; Klipp, E.; Posas, F.: Time-dependent quantitative multicomponent control of the G1-S network by the stress-activated protein kinase Hog1 upon osmostress. Science Signaling 4 (192), p. ra63 (2011)

Iwaniuk, K. M.; Schira, J.; Weinhold, S.; Jung, M.; Adjaye, J.; Muller, H. W.; Wernet, P.; Trompeter, H. I.: Network-like Impact of MicroRNAs on Neuronal Lineage Differentiation of Unrestricted Somatic Stem Cells from Human Cord Blood (USSC). Stem Cells and Development 20 (8), pp. 1383 - 1394 (2011)

Jozefczuk, J.; Prigione, A.; Chavez, L.; Adjaye, J.: Comparative Analysis of Human Embryonic Stem Cell and Induced Pluripotent Stem Cell-Derived Hepatocyte-Like Cells Reveals Current Drawbacks and Possible Strategies for Improved Differentiation. Stem Cells and Development 20 (7), pp. 1259 - 1275 (2011)

Qi, L.; Chen, K.; Hur, D. J.; Yagnik, G.; Lakshmanan, Y.; Kotch, L. E.; Ashrafi, G. H.; Martinez-Murillo, F.; Kowalski, J.; Naydenov, C. et al.; Wittler, L.; Gearhart, J. P.; Draaken, M.; Reutter, H.; Ludwig, M.; Boyadjiev, S. A.: Genome-wide expression profiling of urinary bladder implicates desmosomal and cytoskeletal dysregulation in the bladder exstrophy-epispadias complex. International Journal of Molecular Medicine 27 (6), pp. 755 - 65 (2011)

Zi, Z.; Feng, Z.; Chapnick, D. A.; Dahl, M.; Deng, D.; Klipp, E.; Moustakas, A.; Liu, X.: Quantitative analysis of transient and sustained transforming growth factor-β signaling dynamics. Molecular Systems Biology 2011 (7), 7: 492 (2011)

Zi, Z.: Sensitivity analysis approaches applied to systems biology models. IET Systems Biology 5 (6), pp. 336 - 346 (2011)

Lim, T. S.; Schutze, T.; Lehrach, H.; Glökler, J.; Konthur, Z.: Diversity visualization by endonuclease: A rapid assay to monitor diverse nucleotide libraries. Analytical Biochemestry 411 (1), pp. 16 - 21 (2011)

Zi, Z.: SBML-PET-MPI: a parallel parameter estimation tool for Systems Biology Markup Language based models. Bioinformatics 27 (7), pp. 1028 - 1029 (2011)

Marklein, B.; Konthur, Z.; Cope, A.; Shlomchik, M.; Burmester, G.; Skriner, K.: JKTBP (HNRNPDL) is a novel toll7/9 dependent target in humans and animal models of inflammatory rheumatic diseases. Annals of the Rheumatic Diseases 69 (Suppl 2) (2011)

Schlesinger, J.; Schueler, M.; Grunert, M.; Fischer, J. J.; Zhang, Q.; Krueger, T.; Lange, M.; Tönjes, M.; Dunkel, I.; Sperling, S.: The Cardiac Transcription Network Modulated by Gata4, Mef2a, Nkx2.5, Srf, Histone Modifications, and MircoRNAs. PLoS Genetics 7 (2), e1001313 (2011)

Viswanathan, J.; Haapasalo, A.; Böttcher, C.; Miettinen, R.; Kurkinen, K. M.; Lu, A.; Thomas, A.; Maynard, C. J.; Romano, D.; Hyman, B. T. et al.; Berezovska, O.; Bertram, L.; Soininen, H.; Dantuma, N. P.; Tanzi, R. E.; Hiltunen, M.: Alzheimer's Disease-Associated Ubiquilin-1 Regulates Presenilin-1 Accumulation and Aggresome Formation. Traffic 12 (3), pp. 330 - 348 (2011)

Postma, A. V.; van Engelen, K.; van de Meerakker, J.; Rahman, T.; Probst, S.; Baars, M. J.; Bauer, U.; Pickardt, T.; Sperling, S. R.; Berger, F. et al.; Moorman, A. F.; Mulder, B. J.; Thierfelder, L.; Keavney, B.; Goodship, J.; Klaassen, S.: Mutations in the Sarcomere Protein Gene MYH7 in Ebstein's Anomaly. Circulation: Cardiovascular Genetics 4 (1), pp. 43 - 50 (2011)

Schulz, E. G.; Nora , E. P.; Heard, E.: Rnf12—A Jack of All Trades in X Inactivation? PLoS Genetics 7 (1), e1002002 (2011)

Hallen, L.; Klein, H.; Stoschek, C.; Wehrmeyer, S.; Nonhoff, U.; Ralser, M.; Wilde, J.; Rohr, C.; Schweiger, M. R.; Zatloukal, K. et al.; Vingron, M.; Lehrach, H.; Konthur, Z.; Krobitsch, S.: The KRAB-containing zinc-finger transcriptional regulator ZBRK1 activates SCA2 gene transcription through direct interaction with its gene product, ataxin-2. Human Molecular Genetics 20, pp. 104 - 114 (2011)

Raabe, F. J.; Stephan, M.; Waldeck, J. B.; Huber, V.; Demetriou, D.; Kannaiyan, N.; Galinski, S.; Glaser, L. V.; Wehr, M. C.; Ziller, M. J. et al.; Schmitt, A.; Falkai, P.; Rossner, M. J.: Expression of Lineage Transcription Factors Identifies Differences in Transition States of Induced Human Oligodendrocyte Differentiation. Cells 11 (2), (2):241 (2011)

Klopocki, E.; Lohan, S.; Brancati, F.; Koll, R.; Brehm, A.; Seemann, P.; Dathe, K.; Stricker, S.; Hecht, J.; Bosse, K. et al.; Betz, R. C.; Garaci, F. G.; Dallapiccola, B.; Jain, M.; Muenke, M.; Ng, V. C.; Chan, W.; Chan, D.; Mundlos, S.: Copy-number variations involving the IHH locus are associated with syndactyly and craniosynostosis. American Journal of Human Genetics 88 (1), pp. 70 - 75 (2011)

Aydin, A.; Mortensen, K.; Rybczynski, M.; Sheikhzadeh, S.; Willmann, S.; Bernhardt, A. M.; Hillebrand, M.; Stritzke, J.; Baulmann, J.; Schunkert, H. et al.; Keil, U.; Hense, H. W.; Meisinger, C.; Robinson, P. N.; Berger, J.; Willems, S.; Meinertz, T.; von Kodolitsch, Y.: Central pulse pressure and augmentation index in asymptomatic bicuspid aortic valve disease. Int J Cardiol 147 (3), pp. 466 - 8 (2011)