Scientific Publications

Mauxion, F.; Basquin, J.; Ozgur, S.; Rame, M.; Albrecht, J.; Schäfer, I.; Séraphin, B.; Conti, E.: The human CNOT1-CNOT10-CNOT11 complex forms a structural platform for protein-protein interactions. Cell Reports, 111902 (2022)

Taylor, R. J.; Tagiltsev, G.; Briggs, J. A. G.: The structure of COPI vesicles and regulation of vesicle turnover. FEBS Letters (2022)

Bader, J. M.; Deigendesch, N.; Misch, M.; Mann, M.; Koch, A.; Meissner, F.: Proteomics separates adult-type diffuse high- grade gliomas in metabolic subgroups independent of 1p/19q codeletion and across IDH mutational status. Cell Reports Medicine 4 (1), 100877 (2022)

Chen, X.; Sailer, C.; Kammer, K. M.; Fursch, J.; Eisele, M. R.; Sakata, E.; Pellarin, R.; Stengel, F.: Mono- and Intralink Filter (Mi-Filter) To Reduce False Identifications in Cross-Linking Mass Spectrometry Data. Analytical Chemistry 94, pp. 17751 - 17756 (2022)

Bhatia, H. S.; Brunner, A.-D.; Oeztuerk, F.; Kapoor, S.; Rong, Z.; Mai, H.; Thielert, M.; Ali, M.; Al-Maskari, R.; Paetzold, J. C. et al.; Kofler, F.; Todorov, M. I.; Molbay, M.; Kolabas, Z. I.; Negwer, M.; Hoeher, L.; Steinke, H.; Dima, A.; Gupta, B.; Kaltenecker, D.; Caliskan, O. S.; Brandt, D.; Krahmer, N.; Mueller, S.; Lichtenthaler, S. F.; Hellal, F.; Bechmann, I.; Menze, B.; Theis, F.; Mann, M.; Ertuerk, A.: Spatial proteomics in three-dimensional intact specimens. Cell 185 (26), pp. 5040 - 5058 (2022)

Takei, T.; Tanaka, H.; Okumura, N.; Takao, T.; Moroder, L.; Hojo, H.: Chemical synthesis of per-selenocysteine human epidermal growth factor. Journal of Peptide Science, e15931 (2022)

Schmacke, N. A.; O'Duill, F.; Gaidt, M. M.; Szymanska, I.; Kamper, J. M.; Schmid-Burgk, J. L.; Mädler, S. C.; Mackens-Kiani, T.; Kozaki, T.; Chauhan, D. et al.; Nagl, D.; Stafford, C. A.; Harz, H.; Froehlich, A. L.; Pinci, F.; Ginhoux, F.; Beckmann, R.; Mann, M.; Leonhardt, H.; Hornung, V.: IKKO primes inflammasome formation by recruiting NLRP3 to the trans-Golgi network. Immunity 55 (12), pp. 2271 - 2284 (2022)

Vazquez-Blomquist, D.; Hardy-Sosa, A.; Baez, S. C.; Besada, V.; Palomares, S.; Guirola, O.; Ramos, Y.; Wiśniewski, J. R.; Javier Gonzalez, L.; Bello-Rivero, I.: Proteomics and Phospho-Proteomics Profiling of the Co-Formulation of Type I and II Interferons, HeberFERON, in the Glioblastoma-Derived Cell Line U-87 MG. Cells 11 (24), 4068 (2022)

Murgia, M.; Brocca, L.; Monti, E.; Franchi, M. V. V.; Zwiebel, M.; Steigerwald, S.; Giacomello, E.; Sartori, R.; Zampieri, S.; Capovilla, G. et al.; Gasparini, M.; Biolo, G.; Sandri, M.; Mann, M.; Narici, M. V. V.: Plasma proteome profiling of healthy subjects undergoing bed rest reveals unloading-dependent changes linked to muscle atrophy. Journal of Cachexia, Sarcopenia and Muscle (2022)

Hernandez, B. S.; Mendoza, E. R.: Positive equilibria of power law kinetics on networks with independent linkage classes. Journal of Mathematical Chemistry (2022)

Kunert, F.; Metzner, F. J.; Jung, J.; Höpfler, M.; Woike, S.; Schall, K.; Kostrewa, D.; Moldt, M.; Chen, J.-X.; Bantele, S. et al.; Pfander, B.; Eustermann, S.; Hopfner, K.-P.: Structural mechanism of extranucleosomal DNA readout by the INO80 complex. Science Advances 8 (49), eadd3189 (2022)

Khavnekar, S.; Wan, W.; Majumder, P.; Wietrzynski, W.; Erdmann, P. S.; Plitzko, J. M.: Multishot tomography for high-resolution in situ subtomogram averaging. Journal of Structural Biology 215 (1), 107911 (2022)

Kohl, L.; Siddique, M. N. A. A.; Bodendorfer, B.; Berger, R.; Preikschat, A.; Daniel, C.; Oelke, M.; Liebler-Tenorio, E.; Schulze-Luehrmann, J.; Mauermeir, M. et al.; Yang, K.-T.; Hayek, I.; Szperlinski, M.; Andrack, J.; Schleicher, U.; Bozec, A.; Kroenke, G.; Murray, P. J.; Wirtz, S.; Yamamoto, M.; Schatz, V.; Jantsch, J.; Oefner, P.; Degrandi, D.; Pfeffer, K.; Mertens-Scholz, K.; Rauber, S.; Bogdan, C.; Dettmer, K.; Luehrmann, A.; Lang, R.: Macrophages inhibit Coxiella burnetii by the ACOD1-itaconate pathway for containment of Q fever. EMBO Molecular Medicine, e15931 (2022)

Kong, S.; Gong, P.; Zeng, W.-F.; Jiang, B.; Hou, X.; Zhang, Y.; Zhao, H.; Liu, M.; Yan, G.; Zhou, X. et al.; Qiao, X.; Wu, M.; Yang, P.; Liu, C.; Cao, W.: pGlycoQuant with a deep residual network for quantitative glycoproteomics at intact glycopeptide level. Nature Communications 13 (1), 7539 (2022)

Schink, S.; Ammar, C.; Chang, Y.-F.; Zimmer, R.; Basan, M.: Analysis of proteome adaptation reveals a key role of the bacterial envelope in starvation survival. Molecular Systems Biology 18 (12), e11160 (2022)

Stasi, M.; Monferrer, A.; Babl, L.; Wunnava, S.; Dirscherl, C. F.; Braun, D.; Schwille, P.; Dietz, H.; Boekhoven, J.: Regulating DNA-Hybridization Using a Chemically Fueled Reaction Cycle. Journal of the American Chemical Society 144, pp. 21939 - 21947 (2022)

Zivanov, J.; Otón, J.; Ke, Z.; von Kügelgen, A.; Pyle, E.; Qu, K.; Morado, D.; Castaño-Díez, D.; Zanetti, G.; Bharat, T. A. et al.; Briggs, J. A. G.; Scheres, S. H.: A Bayesian approach to single-particle electron cryo-tomography in RELION-4.0. eLife 11, e83724 (2022)

Schloesser, D.; Lindenthal, L.; Sauer, J.; Chung, K.-J.; Chavakis, T.; Griesser, E.; Baskaran, P.; Maier-Habelsberger, U.; Fundel-Clemens, K.; Schlotthauer, I. et al.; Watson, C. K.; Swee, L. K.; Igney, F.; Park, J. E.; Huber-Lang, M. S.; Thomas, M.-J.; El Kasmi, K. C.; Murray, P. J.: Senescent cells suppress macrophage-mediated corpse removal via upregulation of the CD47-QPCT/L axis. The Journal of Cell Biology: JCB 222 (2), e202207097 (2022)

Sherpa, D.; Mueller, J.; Karayel, Ö.; Xu, P.; Yao, Y.; Chrustowicz, J.; Gottemukkala, K. V.; Baumann, C.; Gross, A.; Czarnecki, O. et al.; Zhang, W.; Gu, J.; Nilvebrant, J.; Sidhu, S. S.; Murray, P. J.; Mann, M.; Weiss, M. J.; Schulman, B. A.; Alpi, A. F.: Modular UBE2H-CTLH E2-E3 complexes regulate erythroid maturation. eLife 11, e77937 (2022)

Boltje, D. B.; Hoogenboom, J. P.; Jakobi, A. J.; Jensen, G. J.; Jonker, C. T. H.; Kaag, M. J.; Koster, A. J.; Last, M. G. F.; Pinto, C. d. A.; Plitzko, J. M. et al.; Raunser, S.; Tacke, S.; Wang, Z.; van der Wee, E. B.; Wepf, R.; den Hoedt, S.; Pfeffer, S. R.: A cryogenic, coincident fluorescence, electron, and ion beam microscope. eLife 11, e82891 (2022)